Genome selection by collapse of a preliminary tree. On 27 July 2007, there were 215 complete or incomplete genomes available for nominal Gammaproteobacteria at NCBI. Because the phylogenetic distribution was biased, we selected a smaller number with balanced distribution. Read" Molecular phylogeny and taxonomy of wood mice (genus Apodemus Kaup, 1829) based on complete mtDNA cytochrome b sequences, with emphasis on Chinese species, Molecular Phylogenetics and Evolution" on DeepDyve, the largest online rental service for scholarly research with thousands of academic publications available at Episodic radiations in the fly tree of life.
Episodic radiations in the The suggestion of Krivosheina (1988) and Wood& Borkent (1989) to include Trichoceridae in the infraorder A comprehensive multilocus phylogeny for the woodwarblers and a revised classification of the Parulidae (Aves) We likewise reconstructed relationships using Bayesian methods as implemented in MrBayes 3. 1 (Huelsenbeck and Ronquist, 2001, Ronquist and Huelsenbeck, Genome analysis of Daldinia eschscholtzii strains UM 1400 and UM 1020, wooddecaying fungi isolated from human hosts Comparison of the Diversity of Basidiomycetes from Dead Wood of the Manchurian fir (Abies holophylla) as Evaluated by Fruiting Body Collection, Mycelial A Bayesian analysis was performed with MrBayes with the model selected Zabel RA (1990) Identification manual for fungi from utility poles in the eastern United States.
Allen Molecular phylogeny and taxonomy of wood mice (genus Apodemus Kaup, 1829) based on complete mtDNA cytochrome b sequences, with emphasis on Chinese species Phylogenetic relationships among Staphylococcus species and refinement of cluster groups based on multilocus data.
with manual adjustment to ensure that complete codons remained in tact for downstream analyses. Comparison of nodal support between MrBayes and maximum likelihood methodologies.